Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932427.1_cds_XP_016478958.1_70546
CDS Infomation

[gene=LOC107800315] [db_xref=GeneID:107800315] [protein=rust resistance kinase Lr10-like isoform X1] [protein_id=XP_016478958.1] [location=join(35409..36078,36612..36641,36731..37842)] [gbkey=CDS]
Sequence

ATGACCATCTTTTTCCTCTTGCACTTACTTCTCATCAACATAGTATTTTTTGCTATGGCC
GGTAAAGGAGCATATGATTGCAAAGAGTCCAGGTGTGGAAGTGATGGCCCTAGCCTTCAT
TTTCCCTTCAGGCTTCAACATCAGCCCGAATATTGTGGCTATCCTGGCTTCGAGTTATTT
TGTGACAGCAAAAACAAAACTATACTCACCCTTTCCAATTCAGTTAGACTGTCTGTTGAA
GAAATTGATTATATGTTTCAGCAGATTCGCCTTTATGATCCTGAACGTTGTCTTATTCTT
AAGCTAGTCCACCTTAATTTATCAACATCTCCTTTCTTTTTAACTGATGAACCCTATTCA
CCAGCTGACTATTCAGTTTTCAAATGTTCTGGTATCACAGCAGGTTATTGGGGCCAACAA
CCTTGTGCCTCTGACAAAGCAATAGTTGGTATTTACTCCTCATGGTCTTTGGATGAACTC
CCCCCTGCAACTTGCAAAAAGATTCTCGAAATTCCATCTGTTCCCTACAGTATGGGAAAC
AATTACCTTCAACTCCGTTGGTCAAATCCGAAATGTAGCTACTGTGAAGGTCTTGGAAAG
GATTGTGGCTTCAAGAACTATACTAAGCAACTGAGAACCCAGTGTCTTGACCGACCATAC
ACTACAAAAGCTGGCAAATTAGAGGAACCACTGATTGCAGGTGGAGTTCTAGGTCTTATT
CTTTTGGGAATTATTATGTTGGCACTCTATGAGTTTTATAGCTCAAGCAAAATAGAAAGA
GAGAATCAAGCGAGAGTTGAAAATTTTCTGGAAGACTACAGAGCTCTCAGGCCTACTAGA
TATACTTACGCAGATCTTAAGAAGGTAACAAATCTGTTTCAGGAAAGATTGGGAGAGGGA
GCTTACGGGGTTGTTTATAAAGGAACACTATCTAATGAAATTCATGTTGCTGTCAAAGTG
CTAAATGACTCCATAGGAAATGGGGAAGAATTTATTAATGAAGTTGCAGCAATGGGAAAA
ATCCACCACTTCAATGTGGTTCGCCTAGTTGGCTATTGTGCTGATGGATTCAGAAACGCT
CTCGTGTATGAATATTTGCCAAATCAGACACTTGACAAACTCATTTTTCCAGCAAGTTCC
AAAGATCGCATTATCCTTAATTGGAAGAAGCTTCAAGATATTGCTATGGGTATAGGGAAA
GGACTGGAGTATCTTCATCAAGGATGTGACCAACAAATCCTTCATTTCGATATCAAACCC
CAAAATATTCTGTTAGACCATAACTTGAACCCAAAGATATCTGATTTTGGTCTTGCCAAG
TTATGCTCTAAAGAGAAAAGTGCTGTAACCATGACTGAAGCTAGAGGAACCATGGGTTAT
ATTGCACCAGAAGTATTATCCAGCAATTTTGGAAAAGCATCTCATAAATCTGATGTCTAT
AGCTTTGGAATGATGCTACATGAAATGGTTGGAGGAAGGAAGAATTTTGACGCAAAGGCC
AGTAATAGCCAAGTGAACTTTCCTGAGTGGATTCATCAACAGTTGAATGAAGGAGAAGAG
TTGAAAATCAGGATAGAGGAAGATGATGATATCATAATTGTAAGGAAATTGGCTATTATA
GGACTTTGGTGCATCCAGTGGAATGCAACGGATCGACCCTCCATCAAAGTTGTTACTCAA
ATGCTAGAAGGAGATGGGAGCAATCTAACTATCCCTCCACCTTTTACAGCAAGATACACC
ACCCACGTAGGAGCTGGACTGGTGGAATGCCCTTCTAGAGAAGAGTTGAGAGAAATATCA
GAACTAGAATGA

Peptide Sequence

PEP ID

XP_016478958.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like isoform X1 [Nicotiana tabacum]
Sequence

MTIFFLLHLLLINIVFFAMAGKGAYDCKESRCGSDGPSLHFPFRLQHQPEYCGYPGFELF
CDSKNKTILTLSNSVRLSVEEIDYMFQQIRLYDPERCLILKLVHLNLSTSPFFLTDEPYS
PADYSVFKCSGITAGYWGQQPCASDKAIVGIYSSWSLDELPPATCKKILEIPSVPYSMGN
NYLQLRWSNPKCSYCEGLGKDCGFKNYTKQLRTQCLDRPYTTKAGKLEEPLIAGGVLGLI
LLGIIMLALYEFYSSSKIERENQARVENFLEDYRALRPTRYTYADLKKVTNLFQERLGEG
AYGVVYKGTLSNEIHVAVKVLNDSIGNGEEFINEVAAMGKIHHFNVVRLVGYCADGFRNA
LVYEYLPNQTLDKLIFPASSKDRIILNWKKLQDIAMGIGKGLEYLHQGCDQQILHFDIKP
QNILLDHNLNPKISDFGLAKLCSKEKSAVTMTEARGTMGYIAPEVLSSNFGKASHKSDVY
SFGMMLHEMVGGRKNFDAKASNSQVNFPEWIHQQLNEGEELKIRIEEDDDIIIVRKLAII
GLWCIQWNATDRPSIKVVTQMLEGDGSNLTIPPPFTARYTTHVGAGLVECPSREELREIS
ELE

Transcript Sequence

Gene sequence data has not been registered.